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Manage cross lists for cross data collection

Manage cross lists for cross data collection

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Domain

Core Breeding

Tool

Cross Manager

User Type

Member

Role

Team Member

Table of Contents

Download data collection files

  1. Tick the checkbox beside the finalized cross list. Click Download cross data collection files > Trait data collection.

image-20251027-065403.png

 

  1. Click the dropdown, select which cross trait or trait lists to add, and click Add. Repeat the step until all cross traits are added.

image-20250811-022317.png

 

  1. Tick the checkbox beside the traits > Export cross list > With trait abbreviations. Users can start collecting data for crosses.

image-20250811-022516.png

 

  1. For Intercross app users, they can also collect the necessary data collection files for crossing data. Refer to the dropdown menus to learn more.

A wishlist enables users to generate crossing data in the app based on the listed parents and their minimum and maximum crossing times. Users can download the wishlist from both Intentional Crossing Nursery (ICN) and non-ICN experiments before using it in the app.

Before exporting the wishlist for ICN experiments, ensure they have the mapped or planted status in the Experiment Manager.

  1. From the Cross Manager data browser, click Download > Intercross - Wishlist beside the cross list. The wishlist will be saved as a CSV file in the local drive.

image-20251003-014520.png

 

  1. Users can then import the wishlist into the app. After recording, they must export the crossing data and upload it to EBS.

image-20251008-020605.png

Another option is to record the cross metadata in a template instead of using the app. The template resembles the export file generated in Intercross, except that the crossDbId is intentionally left blank and is optional.

The crossDbId values listed in the Intercross export file (image below) are the QR code values automatically populated when using the app.

Users are not required to fill out the said column if they opt to load their crossing data using the template.

image-20251008-020041.png

 

  1. From the Cross Manager data browser, click Download > Intercross - Data Template beside the cross list. The data template will be saved as a CSV file in the local drive.

image-20251003-015415.png

 

  1. Fill out the template with the necessary metadata, such as the timestamp, person, experiment, type, fruits, flowers, and seeds. After collecting the cross metadata, users can then upload and save it back to EBS.

image-20251008-015529.png

A wishlist enables users to generate crossing data in the app based on the listed parents and their minimum and maximum crossing times. Users can download the wishlist from both Intentional Crossing Nursery (ICN) and non-ICN experiments before using it in the app.

Before exporting the wishlist for ICN experiments, ensure they have the mapped or planted status in the Experiment Manager.

  1. From the Cross Manager data browser, click Download > Intercross - Wishlist beside the cross list. The wishlist will be saved as a CSV file in the local drive.

image-20251003-014520.png

 

  1. Users can then import the wishlist into the app. After recording, they must export the crossing data and upload it to EBS.

image-20251008-020605.png

Another option is to record the cross metadata in a template instead of using the app. The template resembles the export file generated in Intercross, except that the crossDbId is intentionally left blank and is optional.

The crossDbId values listed in the Intercross export file (image below) are the QR code values automatically populated when using the app.

Users are not required to fill out the said column if they opt to load their crossing data using the template.

image-20251008-020041.png

 

  1. From the Cross Manager data browser, click Download > Intercross - Data Template beside the cross list. The data template will be saved as a CSV file in the local drive.

image-20251003-015415.png

 

  1. Fill out the template with the necessary metadata, such as the timestamp, person, experiment, type, fruits, flowers, and seeds. After collecting the cross metadata, users can then upload and save it back to EBS.

image-20251008-015529.png

 

Upload collected data

  1. Click Upload > Cross Data from the toolbar.

image-20251027-065601.png

 

  1. Click Browse or drag and drop the CSV file containing the collected cross trait data.

  2. Once the file loads, click Upload.

image-20250811-022944.png

 

  1. The Data Collection browser page opens with the uploaded data.

image-20250811-023028.png

 

For Intercross app users, they can upload the collected crossing data in the Cross Manager. Refer to the dropdown to learn more.

  1. From the Cross Manager data browser, click Upload > Intercross from the toolbar. A modal opens where they can upload the file.

image-20251003-021138.png

 

  1. Drag and drop the file or click Browse to locate it.

  2. Once done, click Upload. The file will be saved in the Data Collection tool.

image-20251003-021430.png

 

  1. The system will automatically commit the uploaded Intercross data, as highlighted by the committed status.

image-20251003-022721.png

 

Users can export the committed Intercross data by clicking the Download files icon next to the transaction.

image-20251003-023004.png

  1. From the Cross Manager data browser, click Upload > Intercross from the toolbar. A modal opens where they can upload the file.

image-20251003-021138.png

 

  1. Drag and drop the file or click Browse to locate it.

  2. Once done, click Upload. The file will be saved in the Data Collection tool.

image-20251003-021430.png

 

  1. The system will automatically commit the uploaded Intercross data, as highlighted by the committed status.

image-20251003-022721.png

 

Users can export the committed Intercross data by clicking the Download files icon next to the transaction.

image-20251003-023004.png

 

Send cross list to Harvest Manager

  1. Tick the checkbox beside the cross list.

  2. Click Access breeding tools > Harvest Manager > Harvest Crosses.

image-20251027-065811.png

 

  1. The Harvest Data > Crosses page opens, where users can manage their cross harvest data using Harvest Manager.

image-20250811-023426.png

 

Very good! What are the next steps?

Update harvest data for crosses.

https://ebsproject.atlassian.net/wiki/x/oYB31wY

Update pollination and trait protocols for cross list.

Modify cross list details

Review the Cross Manager statuses.

Cross Manager statuses