Request for F1 hybridity test results

Request for F1 hybridity test results

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Domain

Breeding Analytics

Tool

Molecular Data Analysis

User Type

Member

Role

Team Member


To check if the F1 genotype matches the expected genotype, F1 hybridity testing is performed. As such, users can now generate F1 hybridity results using genotyping requests with the purpose of Hybridity Testing in the MDA tool. Take note that all genotyping data found on the MDA data browser are sourced from the Request Manager tool.

Request for F1 hybridity test

  1. Open a genotyping dataset by clicking the View icon.

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  1. Click the Request Analysis button in the upper-right corner of the screen to create a request. As soon as the request is placed, analysis results are immediately available for viewing.

If the Request Analysis button is not available, it is because there are no genotype data displayed on the Genotype Data tab data browser. Adjust the default call rate thresholds to display the excluded data.

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  1. The F1 Hybridity Results data browser shows a result of either TRUE or FALSE, where:

    • TRUE indicates that the F1 genotype and the expected genotype are a 100% match, while

    • FALSE indicates that the F1 genotype and the expected genotype are not a 100% match.

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Download results

  1. On the toolbar, provide a preferred file name in the text field or use the auto-generated one.

  2. Click the Download icon to start the download process.

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  1. A CSV file is exported containing the results.

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Great! Here’s can be explored more in the Molecular Data Analysis tool.

Search for genotyping results again.

Search for genotyping results or germplasm lists

Manage the genotyping results.

Manage genotyping results