Known Limitations

Known Limitations

Feature Area

Limitation

Impact / Behavior

Workaround / Recommendation

Roadmap / Status

Feature Area

Limitation

Impact / Behavior

Workaround / Recommendation

Roadmap / Status

1

Data Collection

CSV file upload limit: 25 MB per file

Large files (e.g., 40,000 plots with ~10 traits) may result in unfinished validation

Upload in batches (~5,500 plots + 25 traits or ~7,500 plots + 20 traits per batch)

Permanent system limit

2

Data Collection

Suppress/Unsuppress by rule: Multiple data suppression may not work when a previously applied rule is updated and reused

QC rule changes may fail to suppress correctly

Delete the old rule and create a new one

 

3

Data Collection

Timeseries Plot Data Upload - Token expiring due to long process

Large files (e.g, 4,000 plots across multiple occurrences with ~25 traits) with ~50,000 timeseries records) may fail.

Upload in smaller batches batches. (~2,200 plots with ~15 traits)

Initial work on https://ebsproject.atlassian.net/browse/BDS-10355. However the current improvement does not have a 100% success rate. Will continue to improve.

4

Experiment Manager

Select All: Only selects up to 300 occurrences at a time

Users cannot select more than 300 occurrences in one action

Select in batches of 300

Permanent system limit

5

Experiment Manager

Export processes cancel if the user navigates away from the page during export

Incomplete or lost export files

Stay on the page until export completes

 

6

Experiment Manager

Cross Table does not update automatically after entry replacement

Stale data shown in Crosses Browser after replacement

Refresh Crosses Browser manually

 

7

Experiment Creation

Layout rendering delay for 6,000+ records

Slow full-screen layout rendering

Allow extra time for large datasets

 

8

Harvest Manager

Bulk Delete: Committed data of 5,000+ records is slow

Deletion process may appear stuck

Limit deletion to max 50 plots/crosses at a time

 

9

EBS × Field Book Integration

When downloading updated values from EBS back to Field Book, the original value still shows by default in the Collect display (depends on Field Book issue https://github.com/PhenoApps/Field-Book/issues/1475)

Updated values are visible in data grid but not selectable in Collect

Use data grid view to verify updated values

 

10

Analysis Request Manager

Requests with more than 20 traits/jobs may time out

Analysis jobs may fail or take excessively long

Submit requests with 20 or fewer traits/jobs per request

 

11

Phenotypic Data Manager

Large QC code changes may result in slow or stuck saving

Blocks QC work on other occurrences

Process QC changes in smaller batches

 

12

Statistical Design Models

Uploading randomization files for Row-Column design with large number of entries may time out

Upload failure for large designs

Reduce entries or retry

 

13

Molecular Data Analysis (MDA)

Viewing large genotype datasets may cause timeout errors

Users unable to view large datasets

Background processing under continuous development

14

Batch Manager / Haplotype Tracing

Agriplex file upload requires specific headers within the first 10 rows and columns

Upload fails if headers are not "SNP ID", "SNP_ID", "Agriplex_ID", or "Agriplex ID"

Ensure correct headers before uploading

 

15

Batch Manager → MDA Integration

Currently supports small datasets only (max ~1,800 samples × 20 markers)

Large datasets cannot be processed through this integration

Split into smaller datasets

New GIGWA version, together with EBS improvements, is scheduled to be released as soon as possible (July - August)

16

Core System (Data Grid)

"Select All" applies only to items on the current page; selections do not persist across pages

Bulk actions limited to one page at a time

Perform bulk actions per page

Permanent system limit

17

General / Performance

Main browser handles up to ~150K records; Entry/Plot Browser up to ~17K records

Performance degrades beyond these thresholds

Filter data to reduce record count

Permanent system limit

18

Germplasm Manager → Create

Germplasm Manager: The UI's germplasm upload only recognises crops that already exist in the master.scale_value table and not from the master.crop table.

If a crop is missing, you must manually add it to the scale value list.

The fix is scheduled for July 2026 → https://ebsproject.atlassian.net/browse/BDS-10334

 

19

Core Breeding

User might experience occasional slowness on specific actions:

Core Breeding Login

Experiment Creation

  • Basic Information

  • Site tab (10k plots / 150 occurrences)

Experiment Manager

  • Generate Location

Slow performance or occasional timeouts

Consider splitting the experiment into multiple linked experiments to improve performance.

 

Feature Area

Limitation

Impact / Behavior

Workaround / Recommendation

Resolved In

Feature Area

Limitation

Impact / Behavior

Workaround / Recommendation

Resolved In

Data Collection

Time Series Upload: Only one occurrence uploads when files contain multiple

Multiple occurrences in a single file are not all captured

Upload files per occurrence

 26.01.28

Related issue: https://ebsproject.atlassian.net/browse/BDS-7813

Phenotypic Data Manager

Large QC code changes may result in slow or stuck saving

Blocks QC work on other occurrences

 

26.06.24
Related issue: https://ebsproject.atlassian.net/browse/BDS-8975